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Bacteria Collection: Vibrio metschnikovii

NCTC Number: NCTC 8443
Current Name: Vibrio metschnikovii
Original Strain Reference: M 34
Other Collection No: CAIM 317; DSM 19132; ICPB 3551; LMG 11664
Previous Catalogue Name: Vibrio metschnikovii
Type Strain: Yes
Family: Vibrionaceae
Hazard Group (ACDP): 2
Release Restrictions: Terms & Conditions of Supply of Microbial Pathogens: Safety
Conditions for growth on solid media: Columbia blood agar, 24-48 hours, 37°C, aerobic
Conditions for growth on liquid media: nutrient broth,37, facultative anaerobe
Isolated From: bird;from disease of fowls
Whole Genome Sequence: http://www.ebi.ac.uk/ena/data/view/ERS1353906
16S rRNA Gene Sequence: >gb|D11258|NCTC 8443|Vibrio metschnikovii 16S rRNA.| ggtgaaatgcgtaga... >gb|D11307|NCTC 8443|Vibrio metschnikovii 16S rRNA.| acgacgtcaagtcat... >gb|D11209|NCTC8443|Vibrio metschnikovii 16S rRNA.| ctggtctgagaggat...
Bibliography: LEE J V ET AL 1978 INT J SYST BACT 28 99
Extended Bibliography: showhide Show bibliography
Ref #: 72321
Author(s): Kita-Tsukamoto,K.;Oyaizu,H.;Nanba,K.;Simidu,U.
Journal: Int J Syst Bacteriol
Title: Phylogenetic relationships of marine bacteria, mainly members of the family Vibrionaceae, determined on the basis of 16S rRNA sequences
Volume: 43
Page(s): 8-19
Year: 1993
Keyword(s): GENBANK/D11169 GENBANK/D11170 GENBANK/D11171 GENBANK/D11172 GENBANK/D11173 GENBANK/D11174 GENBANK/D11175 GENBANK/D11176 GENBANK/D11177 GENBANK/D11178 GENBANK/D11179 GENBANK/D11180 GENBANK/D11181 GENBANK/D11182 GENBANK/D11183 GENBANK/D11184 GENBANK/D11185 GENBANK/D11186 GENBANK/D11187 GENBANK/D11188 GENBANK/D11189 GENBANK/D11190 GENBANK/D11191 GENBANK/D11192 GENBANK/D11193 GENBANK/D11194 GENBANK/D11195 GENBANK/D11196 GENBANK/D11197 GENBANK/D11198 etc. Base Sequence Molecular Sequence Data *Phylogeny RNA, Ribosomal, 16S/classification/*genetics/*isolation & purification Seawater Sequence Homology, Nucleic Acid Vibrionaceae/*classification/*genetics/metabolism *Water Microbiology
Remarks: The phylogenetic relationships of 50 reference strains, mostly marine bacteria which require Na+ for growth, were determined on the basis of 600 16S rRNA nucleotides by using reverse transcriptase sequencing. Strains belonging to 10 genera were included (four genera of the family Vibrionaceae, the genus Aeromonas of the family Aeromonadaceae, and the genera Alteromonas, Marinomonas, Shewanella, Pseudomonas, and Deleya). The sequences were aligned, the similarity values and evolutionary distance values were determined, and a phylogenetic tree was constructed by using the neighbor-joining method. On the basis of our results, the family Vibrionaceae was separated into at least seven groups (genera and families). Vibrio marinus clearly was on a line of descent that was remote from other vibrios. As determined by the similarity and evolutionary distance values, V. marinus is more distantly related to the family Vibrionaceae than the members of the Aeromonadaceae are. Also, Vibrio cholerae strains formed a separate group with Vibrio mimicus at the genus level. Of 30 species of the Vibrionaceae, 17 formed a large phylogenetic cluster. The genus Listonella was found to be a heterogeneous group, and the species were distributed in various subgroups of the Vibrionaceae. The separation of the family Aeromonadaceae from the family Vibrionaceae and the separation of the genera Marinomonas and Shewanella from the genus Alteromonas were confirmed in this phylogenetic study. However, a marine Pseudomonas species, Pseudomonas nautica, was clearly separated from two terrestrial Pseudomonas species. Each group that was separated by the phylogenetic analysis had characteristic 16S rRNA sequence patterns that were common only to species in that group. Therefore, the characteristic sequences described in this paper may be useful for identification purposes.
URL: 8427811
Ref #: 13681
Author(s): Kita-Tsukamoto,K.;Oyaizu,H.;Nanba,K.;Simidu,U.
Journal: Int J Syst Bacteriol
Title: Phylogenetic relationships of marine bacteria, mainly members of the
Volume: 43
Page(s): 8-19
Year: 1993
Keyword(s): 0 (RNA, Ribosomal, 16S) Base Sequence Comparative Study Molecular Sequence Data *Phylogeny RNA, Ribosomal, 16S/classification/*genetics/*isolation & purification Seawater Sequence Homology, Nucleic Acid Support, Non-U.S. Gov't Vibrionaceae/*classification/*genetics/metabolism *Water Microbiology
Remarks: The phylogenetic relationships of 50 reference strains, mostly marine
URL: 93152464
Data: (ICPB 3551) Type strain / R. J. Evans, LSH & TM London in 1951 / NCTC as NCTC 262 / Lister Institute (originally isolated by Gamelia from disease in fowls, see 1st edn. NCTC catalogue 1922) / Fowl / Lee, J. V. et al. (1978) Int. J. syst. Bact. 28, 99
Accession Date: 01/01/1951
History: ISOLATED BY GAMALEIA - NCTC 262 - EVANS R J LSH & TM LONDON PRE:FR
Authority: Gamaleia 1888 (AL)
Depositor: EVANS R J
Taxonomy: TaxLink: S3555 (Vibrio metschnikovii Gamaleia 1888) - Date of change: 5/02/2003
Biosafety Responsibility: It is the responsibility of the customer to ensure that their facilities comply with biosafety regulations for their own country

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