Extended Bibliography: |
Show bibliography
Ref #: |
20136 |
Author(s): |
Shida,O.;Takagi,H.;Kadowaki,K.;Komagata,K. |
Journal: |
Int J Syst Bacteriol |
Title: |
Proposal for two new genera, Brevibacillus gen. nov. and Aneurinibacillus gen. nov |
Volume: |
46 |
Page(s): |
939-46 |
Year: |
1996 |
Keyword(s): |
GENBANK/D78454
GENBANK/D78455
GENBANK/D78456
GENBANK/D78457
GENBANK/D78458
GENBANK/D78459
GENBANK/D78460
GENBANK/D78461
GENBANK/D78462
GENBANK/D78463
GENBANK/D78464
Bacillus/*classification/genetics
Base Sequence
DNA, Ribosomal/chemistry
Molecular Sequence Data
Phylogeny
Polymerase Chain Reaction
RNA, Ribosomal, 16S/genetics
|
Remarks: |
16S rRNA gene sequences of the type strains of 11 species belonging to the Bacillus brevis and Bacillus aneurinolyticus groups were determined. On the basis of the results of gene sequence analyses, these species were separated into two clusters. The B. brevis cluster included 10 species, namely, Bacillus brevis, Bacillus agri, Bacillus centrosporus, Bacillus choshinensis, Bacillus parabrevis, Bacillus reuszeri, Bacillus formosus, Bacillus borstelensis, Bacillus laterosporus, and Bacillus thermoruber. Bacillus aneurinolyticus and Bacillus migulanus belonged to the B. aneurinolyticus cluster. Moreover, the two clusters were phylogenetically distinct from other Bacillus, Amphibacillus, Sporolactobacillus, Paenibacillus, and Alicyclobacillus species. On the basis of our data, we propose reclassification of the B. brevis cluster as Brevibacillus gen. nov. and reclassification of the B. aneurinolyticus cluster as Aneurinibacillus gen. nov. By using 16S rRNA gene sequence alignments, two specific PCR amplification primers were designed for differentiating the two new genera from each other and from other aerobic, endospore-forming organisms. |
URL: |
8863420 |
|
Ref #: |
20135 |
Author(s): |
Goto,K.;Fujita,R.;Kato,Y.;Asahara,M.;Yokota,A. |
Journal: |
Int J Syst Evol Microbiol |
Title: |
Reclassification of Brevibacillus brevis strains NCIMB 13288 and DSM 6472 (=NRRL NRS-887) as Aneurinibacillus danicus sp. nov. and Brevibacillus limnophilus sp. nov |
Volume: |
54 |
Page(s): |
419-27 |
Year: |
2004 |
Keyword(s): |
GENBANK/AB112712
GENBANK/AB112713
GENBANK/AB112714
GENBANK/AB112715
GENBANK/AB112716
GENBANK/AB112717
GENBANK/AB112718
GENBANK/AB112719
GENBANK/AB112720
GENBANK/AB112721
GENBANK/AB112722
GENBANK/AB112723
GENBANK/AB112724
GENBANK/AB112725
GENBANK/AB112726
GENBANK/AB112727
GENBANK/AB112728
GENBANK/AB112729
GENBANK/AB112730
GENBANK/AB112731
Bacillaceae/*classification/genetics/growth & development
Base Composition
Base Sequence
DNA Primers
DNA, Bacterial/genetics
DNA, Ribosomal/genetics
Fatty Acids/analysis
Molecular Sequence Data
Phylogeny
RNA, Bacterial/genetics
RNA, Ribosomal, 16S/genetics
|
Remarks: |
Comparison of the hypervariable region (269-279 bases in length) at the 5' end of the 16S rDNA sequences of 29 bacterial strains that were identified previously as Brevibacillus brevis showed that 13 strains clustered with Aneurinibacillus species, eight strains clustered with Bacillus species and eight strains clustered with Brevibacillus species. Based on DNA-DNA hybridization results, 27 strains, not including [Brevibacillus brevis] NCIMB 13288 and [Brevibacillus brevis] DSM 6472, were reidentified as Aneurinibacillus migulanus, Aneurinibacillus thermoaerophilus, Bacillus methanolicus, Bacillus oleronius, Brevibacillus agri, Brevibacillus brevis and Brevibacillus parabrevis. [Brevibacillus brevis] NCIMB 13288, which was located in the Aneurinibacillus cluster, showed low DNA-DNA relatedness (<14 %) and low 16S rDNA sequence similarity (96.8-97.9 %) to other Aneurinibacillus species. [Brevibacillus brevis] DSM 6472, which was located in the Brevibacillus cluster, also showed low DNA-DNA relatedness (<12 %) and low 16S rDNA sequence similarity (95.4-98.8 %) to other Brevibacillus species. These genotypic and phylogenetic data, plus phenotypic and chemotaxonomic characteristics, suggest that [Brevibacillus brevis] NCIMB 13288 (=IAM 15048) and [Brevibacillus brevis] DSM 6472 (=NRRL NRS-887) represent novel species of the genera Aneurinibacillus and Brevibacillus, respectively, for which the names Aneurinibacillus danicus sp. nov. and Brevibacillus limnophilus sp. nov. are proposed. |
URL: |
15023954 |
|
Ref #: |
12125 |
Author(s): |
Shida,O.;Takagi,H.;Kadowaki,K.;Komagata,K. |
Journal: |
Int J Syst Bacteriol |
Title: |
Proposal for two new genera, Brevibacillus gen. nov. and Aneurinibacillus gen. nov |
Volume: |
46 |
Page(s): |
939-46 |
Year: |
1996 |
Keyword(s): |
GENBANK/D78454
GENBANK/D78455
GENBANK/D78456
GENBANK/D78457
GENBANK/D78458
GENBANK/D78459
GENBANK/D78460
GENBANK/D78461
GENBANK/D78462
GENBANK/D78463
GENBANK/D78464
Bacillus/*classification/genetics
Base Sequence
DNA, Ribosomal/chemistry
Molecular Sequence Data
Phylogeny
Polymerase Chain Reaction
RNA, Ribosomal, 16S/genetics
|
Remarks: |
16S rRNA gene sequences of the type strains of 11 species belonging to the Bacillus brevis and Bacillus aneurinolyticus groups were determined. On the basis of the results of gene sequence analyses, these species were separated into two clusters. The B. brevis cluster included 10 species, namely, Bacillus brevis, Bacillus agri, Bacillus centrosporus, Bacillus choshinensis, Bacillus parabrevis, Bacillus reuszeri, Bacillus formosus, Bacillus borstelensis, Bacillus laterosporus, and Bacillus thermoruber. Bacillus aneurinolyticus and Bacillus migulanus belonged to the B. aneurinolyticus cluster. Moreover, the two clusters were phylogenetically distinct from other Bacillus, Amphibacillus, Sporolactobacillus, Paenibacillus, and Alicyclobacillus species. On the basis of our data, we propose reclassification of the B. brevis cluster as Brevibacillus gen. nov. and reclassification of the B. aneurinolyticus cluster as Aneurinibacillus gen. nov. By using 16S rRNA gene sequence alignments, two specific PCR amplification primers were designed for differentiating the two new genera from each other and from other aerobic, endospore-forming organisms. |
URL: |
97016794 |
|
Ref #: |
2358 |
Author(s): |
Roberts,R.J. |
Journal: |
Nucl. Acids Res. |
Title: |
Restriction and modification enzymes and their recognition sequences. |
Volume: |
13, |
Page(s): |
r165-r200 |
Year: |
1985 |
|
Ref #: |
2789 |
Author(s): |
Slapikoff,S.;Spitzer,J.L.;Vaccaro,D. |
Journal: |
J. Bacteriol. |
Title: |
Sporulation in Bacillus brevis: studies on protease and protein turnover. |
Volume: |
106 |
Page(s): |
739-744 |
Year: |
1971 |
|
Ref #: |
2790 |
Author(s): |
Matteo,C.C.;Cooney,C.L.;Demain,A.L. |
Journal: |
J. Gen. Microbiol. |
Title: |
Production of Gramicidin S synthetases by Bacillus brevis. |
Volume: |
96 |
Page(s): |
415-422 |
Year: |
1976 |
|
Ref #: |
4775 |
Author(s): |
Takagi,H.;Shida,O.;Kadowaki,K.;Komagata,K.;Udaka,S. |
Journal: |
Int. J. Syst. Bacteriol. |
Title: |
Characterization of Bacillus brevis with descriptions of Bacillus migulanus sp. nov., Bacillus choshinensis sp. nov., Bacillus parabrevis sp. nov., and Bacillus galactophilus sp. nov. |
Volume: |
43 |
Page(s): |
221-231 |
Year: |
1993 |
|
Ref #: |
5252 |
Author(s): |
Shida,O.;Takagi,H.;Kadowaki,K.;Udaka,S.;Nakamura,L.K.;Komagata,K. |
Journal: |
Int. J. Syst. Bacteriol. |
Title: |
Proposal of Bacillus reuszeri sp. nov., Bacillus formosus sp. nov., nom. rev., and Bacillus borstelensis, sp. nov., nom. rev. |
Volume: |
45 |
Page(s): |
93-100 |
Year: |
1995 |
|
Ref #: |
6650 |
Author(s): |
Shida,O.;Takagi,H.;Kadowaki,K.;Komagata,K. |
Journal: |
Int. J. Syst. Bacteriol. |
Title: |
Proposal for two new genera, Brevibacillus gen. nov. and Aneurinibacillus gen. nov. |
Volume: |
46 |
Page(s): |
939-946 |
Year: |
1996 |
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