Extended Bibliography: |
Show bibliography
Ref #: |
95459 |
Author(s): |
Regensburger,A.;Ludwig,W.;Frank,R.;Blocker,H.;Schleifer,K.H. |
Journal: |
Nucleic Acids Res |
Title: |
Complete nucleotide sequence of a 23S ribosomal RNA gene from Micrococcus luteus |
Volume: |
16 |
Page(s): |
2344 |
Year: |
1988 |
Keyword(s): |
GENBANK/X06484
Base Sequence
DNA, Ribosomal/*genetics
Micrococcus/*genetics
Molecular Sequence Data
RNA, Ribosomal/*genetics
RNA, Ribosomal, 23S/*genetics
|
URL: |
3357787 |
|
Ref #: |
95460 |
Author(s): |
Roller,C.;Ludwig,W.;Schleifer,K.H. |
Journal: |
J Gen Microbiol |
Title: |
Gram-positive bacteria with a high DNA G+C content are characterized by a common insertion within their 23S rRNA genes |
Volume: |
138 |
Page(s): |
1167-75 |
Year: |
1992 |
Keyword(s): |
GENBANK/J01695
GENBANK/K00637
GENBANK/K02663
GENBANK/L05015
GENBANK/M10606
GENBANK/M31904
GENBANK/M32365
GENBANK/M62805
GENBANK/M62806
GENBANK/M62807
GENBANK/M85086
GENBANK/M85087
GENBANK/M85088
GENBANK/M85089
GENBANK/M85090
GENBANK/M85091
GENBANK/M85092
GENBANK/M85093
GENBANK/M85094
GENBANK/X00007
GENBANK/X00343
GENBANK/X00512
GENBANK/X06458
GENBANK/X07408
GENBANK/X12612
GENBANK/X14249
GENBANK/X16368
GENBANK/X53853
GENBANK/X53854
GENBANK/X53855
Base Composition
Base Sequence
DNA Transposable Elements/*genetics
DNA, Bacterial/*genetics
DNA, Ribosomal/*genetics
Gram-Positive Bacteria/classification/*genetics
Molecular Sequence Data
Nucleic Acid Conformation
RNA, Ribosomal, 23S/*genetics
Sequence Homology, Nucleic Acid
|
Remarks: |
An insertion of about 100 bases within the central part of the 23S rRNA genes was found to be a phylogenetic marker for the bacterial line of descent of Gram-positive bacteria with a high DNA G + C content. The insertion was present in 23S rRNA genes of 64 strains representing the major phylogenetic groups of Gram-positive bacteria with a high DNA G+C content, whereas it was not found in 23S rRNA genes of 55 (eu)bacteria representing Gram-positive bacteria with a low DNA G + C content and all other known (eu)bacterial phyla. The presence of the insertion could be easily demonstrated by comparative gel electrophoretic analysis of in vitro-amplified 23S rDNA fragments, which contained the insertion. The nucleotide sequences of the amplified fragments were determined and sequence similarities of at least 44% were found. The overall similarity values are lower than those of 16S and 23S rRNA sequences of the particular organism. Northern hybridization experiments indicated the presence of the insertion within the mature 23S rRNA of Corynebacterium glutamicum. |
URL: |
1326592 |
|
Ref #: |
13124 |
Author(s): |
Regensburger,A.;Ludwig,W.;Frank,R.;Blocker,H.;Schleifer,K.H. |
Journal: |
Nucleic Acids Res |
Title: |
Complete nucleotide sequence of a 23S ribosomal RNA gene from Micrococcus luteus |
Volume: |
16 |
Page(s): |
2344 |
Year: |
1988 |
Keyword(s): |
GENBANK/X06484
Base Sequence
DNA, Ribosomal/*genetics
Micrococcus/*genetics
Molecular Sequence Data
RNA, Ribosomal/*genetics
RNA, Ribosomal, 23S/*genetics
Support, Non-U.S. Gov't
|
URL: |
88189834 |
|
Ref #: |
13125 |
Author(s): |
Roller,C.;Ludwig,W.;Schleifer,K.H. |
Journal: |
J Gen Microbiol |
Title: |
Gram-positive bacteria with a high DNA G+C content are characterized by a common insertion within their 23S rRNA genes |
Volume: |
138 ( Pt 6) |
Page(s): |
1167-75 |
Year: |
1992 |
Keyword(s): |
GENBANK/J01695
GENBANK/K00637
GENBANK/K02663
GENBANK/L05015
GENBANK/M10606
GENBANK/M31904
GENBANK/M32365
GENBANK/M62805
GENBANK/M62806
GENBANK/M62807
GENBANK/M85086
GENBANK/M85087
GENBANK/M85088
GENBANK/M85089
GENBANK/M85090
GENBANK/M85091
GENBANK/M85092
GENBANK/M85093
GENBANK/M85094
GENBANK/X00007
GENBANK/X00343
GENBANK/X00512
GENBANK/X06458
GENBANK/X07408
GENBANK/X12612
GENBANK/X14249
GENBANK/X16368
GENBANK/X53853
GENBANK/X53854
GENBANK/X53855
Base Composition
Base Sequence
Comparative Study
DNA Transposable Elements/*genetics
DNA, Bacterial/*genetics
DNA, Ribosomal/*genetics
Gram-Positive Bacteria/classification/*genetics
Molecular Sequence Data
Nucleic Acid Conformation
RNA, Ribosomal, 23S/*genetics
Sequence Homology, Nucleic Acid
Support, Non-U.S. Gov't
|
Remarks: |
An insertion of about 100 bases within the central part of the 23S rRNA genes was found to be a phylogenetic marker for the bacterial line of descent of Gram-positive bacteria with a high DNA G + C content. The insertion was present in 23S rRNA genes of 64 strains representing the major phylogenetic groups of Gram-positive bacteria with a high DNA G+C content, whereas it was not found in 23S rRNA genes of 55 (eu)bacteria representing Gram-positive bacteria with a low DNA G + C content and all other known (eu)bacterial phyla. The presence of the insertion could be easily demonstrated by comparative gel electrophoretic analysis of in vitro-amplified 23S rDNA fragments, which contained the insertion. The nucleotide sequences of the amplified fragments were determined and sequence similarities of at least 44% were found. The overall similarity values are lower than those of 16S and 23S rRNA sequences of the particular organism. Northern hybridization experiments indicated the presence of the insertion within the mature 23S rRNA of Corynebacterium glutamicum. |
URL: |
92407488 |
|
Ref #: |
1300 |
Author(s): |
Skerman,V.B.D.;McGowan,V.;Sneath,P.H.A.(ed) |
Journal: |
Int. J. Syst. Bacteriol. |
Title: |
Approved Lists of Bacterial Names. |
Volume: |
30 |
Page(s): |
225-420 |
Year: |
1980 |
|
Ref #: |
1335 |
Author(s): |
Schleifer,K.H.;Heise,W.;Meyer,S.A. |
Journal: |
FEMS Microbiol. Lett. |
Title: |
Deoxyribonucleic acid hybridization studies among some micrococci. |
Volume: |
6 |
Page(s): |
33-36 |
Year: |
1979 |
|
Ref #: |
450 |
Author(s): |
Fleming,A. |
Journal: |
Lancet |
Title: |
Lysozyme: a bacteriolytic ferment found normally in tissues and secretions. |
Volume: |
1 |
Page(s): |
217-220 |
Year: |
1929 |
|
Ref #: |
495 |
Author(s): |
Schleifer,K.H.;Kloos,W.E.;Moore,A. |
Journal: |
Int. J. Syst. Bacteriol. |
Title: |
Taxonomic status of Micrococcus luteus (Schroeter 1872) Cohn 1872: correlation between peptidoglycan type and genetic compatibility. |
Volume: |
22 |
Page(s): |
224-227 |
Year: |
1972 |
|
Ref #: |
499 |
Author(s): |
Silvestri,L.G.;Hill,L.R. |
Journal: |
J. Bacteriol. |
Title: |
Agreement between deoxyribonucleic acid base composition and taxometric classification of Gram-positive cocci. |
Volume: |
90 |
Page(s): |
136-140 |
Year: |
1965 |
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