Culture Collections

Bacteria and Mycoplasmas detail

Conditions of Supply of Microbial Pathogens: Safety





Bacteria Collection: Shewanella baltica

NCTC Number: NCTC 10735
Current Name: Shewanella baltica
Original Strain Reference: 63
Other Collection No: CECT 323; DSM 9439; IAM 1477; LMG 2250
Previous Catalogue Name: Shewanella putrefaciens
Type Strain: Yes
Family: Shewanellaceae
Release Restrictions: Terms & Conditions of Supply of Microbial Pathogens: Safety
Conditions for growth on solid media: Nutrient agar, 24-48 hours, 30°C, aerobic
Whole Genome Sequence: http://www.ebi.ac.uk/ena/data/view/ERS1353905
16S rRNA Gene Sequence: >gb|AJ000214|NCTC 10735|Shewanella baltica NCTC10735 16S rRNA gene.| agtttgatcatggct...
Miscellaneous Sequence Data: >gb|AB231331|NCTC 10735|Shewanella baltica gyrB gene for DNA gyrase B subunit, partial cds.| gtgtatcggttgtaa...
Extended Bibliography: showhide Show bibliography
Ref #: 79346
Author(s): Ziemke,F.;Hofle,M.G.;Lalucat,J.;Rossello-Mora,R.
Journal: Int J Syst Bacteriol
Title: Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov
Volume: 48 Pt 1
Page(s): 179-86
Year: 1998
Keyword(s): GENBANK/AJ000213 GENBANK/AJ000214 GENBANK/AJ000215 GENBANK/AJ000216 GENBANK/AJ000277 GENBANK/AJ000278 GENBANK/AJ001279 GENBANK/AJ001280 GENBANK/AJ001281 GENBANK/AJ001282 GENBANK/AJ001283 GENBANK/AJ001284 GENBANK/AJ001285 GENBANK/AJ001286 GENBANK/AJ001287 GENBANK/AJ001288 DNA, Bacterial/analysis Fresh Water/*microbiology Genome, Bacterial Gram-Negative Facultatively Anaerobic Rods/*classification/genetics Molecular Sequence Data Nucleic Acid Hybridization Phenotype Phylogeny RNA, Bacterial/analysis RNA, Ribosomal, 16S/analysis Seawater/*microbiology
Remarks: The taxonomic relationship between several Shewanella putrefaciens isolates from the Baltic Sea and reference strains of this species is presented in this study. Results from DNA-DNA hybridization using a newly developed non-radioactive detection system and from 16S rRNA gene sequencing demonstrated that S. putrefaciens is a heterogeneous species containing more than a single genomic group. The genomic group II was phylogenetically, genotypically and phenotypically distant enough from the species type strain to be classified as a single species within the genus Shewanella. Therefore, we propose to reclassify Owen's genomic group II as Shewanella baltica sp. nov. with the type strain NCTC 10735.
URL: 9542087
Ref #: 50623
Author(s): Satomi,M.;Vogel,B.F.;Gram,L.;Venkateswaran,K.
Journal: Int J Syst Evol Microbiol
Title: Shewanella hafniensis sp. nov. and Shewanella morhuae sp. nov., isolated from marine fish of the Baltic Sea
Volume: 56
Page(s): 243-9
Year: 2006
Keyword(s): GENBANK/AB205566 GENBANK/AB205576 GENBANK/AB208056 GENBANK/AB208062 Animals Base Composition DNA Gyrase/genetics DNA, Bacterial/chemistry Denmark Flounder/*microbiology Gadiformes/*microbiology Molecular Sequence Data Oceans and Seas RNA, Bacterial/genetics RNA, Ribosomal, 16S/genetics Sequence Homology, Nucleic Acid Shewanella/chemistry/*classification/isolation & purification/physiology Species Specificity
Remarks: Two novel species belonging to the genus Shewanella are described on the basis of their phenotypic characteristics, phylogenetic analyses of 16S rRNA and gyrB gene sequences and levels of DNA-DNA hybridization. A total of 47 strains belonging to two novel Gram-negative, psychrotolerant, H2S-producing bacterial species were isolated from marine fish (cod and flounder) caught from the Baltic Sea off Denmark. The phenotypic characteristics of strains belonging to group 1 (14 strains) indicated that these represented a non-sucrose-assimilating variant of Shewanella baltica with a DNA G+C content of 47.0 mol%. Strains of group 2 (33 isolates) did not utilize the carbon substrates assimilated by S. baltica except gluconate, N-acetylglucosamine and malate. Their DNA G+C content was 44.0 mol%. Phylogenetic analysis of the 16S rRNA gene sequence data placed the two novel species within the genus Shewanella. Group 1 strains showed greatest sequence similarity to Shewanella putrefaciens ATCC 8071T (99.0 %) and with S. baltica NCTC 10375(T) (98.3 %). However, gyrB gene sequence analysis showed these isolates to share only 90.0 % sequence similarity with S. putrefaciens ATCC 8071T and 93.9 % with S. baltica NCTC 10375T. Similarly, DNA-DNA hybridization experiments revealed DNA relatedness levels of 38 % between the group 1 isolates and S. putrefaciens ATCC 8071T and 43 % with S. baltica NCTC 10375T. The group 2 strains shared less than 97 % 16S rRNA gene sequence similarities with recognized Shewanella species. Comparisons between the two novel species indicated 16S rRNA gene sequence similarity of approximately 98 %, gyrB gene sequence similarity of approximately 89 % and DNA-DNA reassociation values of 20-34 %. Based on the evidence presented, two novel species, Shewanella hafniensis sp. nov. (type strain P010T = ATCC BAA-1207T = NBRC 100975T) and Shewanella morhuae sp. nov. (type strain U1417T = ATCC BAA-1205T = NBRC 100978T), are described.
URL: 16403893
Ref #: 4902
Author(s): MacDonell,M.T.;Colwell,R.R.
Journal: System. Appl. Microbiol.
Title: Phylogeny of the Vibrionaceae, and recommendation for two new genera, Listonella and Shewanella.
Volume: 6
Page(s): 171-182
Year: 1985
Ref #: 7052
Author(s): Ziemke,F.;Höfle,M.G.;Lalucat,J.;Rosselló-Mora,R.
Journal: Int. J. Syst. Bacteriol.
Title: Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov.
Volume: 48
Page(s): 179-186
Year: 1998
Ref #: 13688
Author(s): Ziemke,F.;Hofle,M.G.;Lalucat,J.;Rossello-Mora,R.
Journal: Int J Syst Bacteriol
Title: Reclassification of Shewanella putrefaciens Owen's genomic group II as
Volume: 48 Pt 1
Page(s): 179-186
Year: 1998
Keyword(s): 0 (DNA, Bacterial) 0 (RNA, Bacterial) 0 (RNA, Ribosomal, 16S) DNA, Bacterial/analysis Fresh Water/*microbiology Genome, Bacterial Gram-Negative Facultatively Anaerobic Rods/*classification/genetics Molecular Sequence Data Nucleic Acid Hybridization Phenotype Phylogeny RNA, Bacterial/analysis RNA, Ribosomal, 16S/analysis Seawater/*microbiology Support, Non-U.S. Gov't
Remarks: The taxonomic relationship between several Shewanella putrefaciens
URL: 98203190
Data: (AJ 2259, IAM 1477) K. Komagata, Tokyo in 1970 / Oil-brine / Iizuka, H. & Komagata, K. (1964) J. gen. appl. Microbiol., Tokyo, 10, 223 / Macdonell, M.T. & Colwell, R. R. (1985) Syst. appl. Microbiol 6, 281 / Validation List No. 22 (1986) Inst. J. syst. Bact. 36, 573
Accession Date: 04/02/2003
History: Name updated from Shewanella putrefaciens to Shewanella baltica on 28 February 2014
Authority: (Lee et al. 1981) MacDonell and Colwell 1986
Taxonomy: TaxLink: S2711 (Shewanella putrefaciens (lee et al. 1981) macdonell and colwell 1986) - Date of change: 16/06/2007 by NCTCUp to 16/06/2007: ? (NCTC 10735) - Date of change: 04/02/2003
Biosafety Responsibility: It is the responsibility of the customer to ensure that their facilities comply with biosafety regulations for their own country

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