NCTC Number: |
NCTC 10119
|
Current Name: |
Mycoplasma pneumoniae
|
Original Strain Reference: |
FH
|
Other Collection No: |
ATCC 15531; FH
|
Previous Catalogue Name: |
Mycoplasma pneumoniae
|
Type Strain: |
Yes
|
Family: |
Mycoplasmataceae
|
Hazard Group (ACDP): |
2
|
Release Restrictions: |
Terms & Conditions of Supply of Microbial Pathogens: Safety
|
Isolated From: |
human, human pneumonia
|
Whole Genome Sequence: |
http://www.ebi.ac.uk/ena/data/view/ERS1295756
|
16S rRNA Gene Sequence: |
>gb|AF132740|ATCC 15531|Mycoplasma pneumoniae strain ATCC 15531 16S ribosomal RNA gene and16S-23S rRNA intergenic spacer, complete sequence.| ttaacgctggcggca... >gb|AY816339|ATCC 15531|Mycoplasma pneumoniae strain ATCC 15531 16S ribosomal RNA gene,partial sequence; 16S-23S ribosomal RNA intergenic spacer, completesequence; and 23S ribosomal RNA gene, partial sequence.| cgcccgtcaaactat...
|
23S rRNA Gene Sequence: |
>gb|AF132740|ATCC 15531|Mycoplasma pneumoniae strain ATCC 15531 16S ribosomal RNA gene and16S-23S rRNA intergenic spacer, complete sequence.| ttaacgctggcggca... >gb|AY816339|ATCC 15531|Mycoplasma pneumoniae strain ATCC 15531 16S ribosomal RNA gene,partial sequence; 16S-23S ribosomal RNA intergenic spacer, completesequence; and 23S ribosomal RNA gene, partial sequence.| cgcccgtcaaactat...
|
Bibliography: |
LIU C ET AL 1959 J EXP MED 109 545;LIU C 1957 J EXP MED 106 455; CHANOCK R
|
Extended Bibliography: |
Show bibliography
Ref #: |
95481 |
Author(s): |
Kim,K.S.;Ko,K.S.;Chang,M.W.;Hahn,T.W.;Hong,S.K.;Kook,Y.H. |
Journal: |
FEMS Microbiol Lett |
Title: |
Use of rpoB sequences for phylogenetic study of Mycoplasma species |
Volume: |
226 |
Page(s): |
299-305 |
Year: |
2003 |
Keyword(s): |
GENBANK/AY191418
GENBANK/AY191419
GENBANK/AY191420
GENBANK/AY191421
GENBANK/AY191422
GENBANK/AY191423
GENBANK/AY191424
GENBANK/AY191425
GENBANK/AY191426
GENBANK/AY191427
GENBANK/AY191428
GENBANK/AY191429
GENBANK/AY191430
GENBANK/AY191431
GENBANK/AY191432
GENBANK/AY191433
GENBANK/AY191434
GENBANK/AY191435
GENBANK/AY191436
GENBANK/AY191437
GENBANK/AY191438
GENBANK/AY191439
GENBANK/AY191440
GENBANK/AY191441
GENBANK/AY191442
GENBANK/AY191443
Amino Acid Sequence
DNA, Ribosomal/chemistry/genetics
DNA-Directed RNA Polymerases/*chemistry/*genetics
Genes, Bacterial
Molecular Sequence Data
Mycoplasma/classification/*genetics
*Phylogeny
RNA, Ribosomal, 16S/genetics
Sequence Alignment
Sequence Homology, Amino Acid
Sequence Homology, Nucleic Acid
Ureaplasma/genetics
|
Remarks: |
rpoB sequences encoding the beta-subunit of RNA polymerase were determined in 26 Mycoplasma species for phylogenetic study. The portion of rpoB DNA used in this study showed a high degree of variation in terms of size and sequence among species. The rpoB phylogenies inferred from amino acid and nucleotide sequences were used to divide the mycoplasmas into two groups, a 'pneumoniae group' and a 'hominis group', which was consistent with the result from 16S rDNA sequence analysis. However, phylogenetic relationships within these groups differed in the two gene trees, which were supported by the incongruence length difference (ILD) test. This indicates that multiple gene sequences must be applied to infer accurate phylogenetic relationships among the mycoplasmas. The rpoB sequence, and especially the deduced amino acid sequence, offers a good alternative marker. |
URL: |
14553926 |
|
Ref #: |
95435 |
Author(s): |
Volokhov,D.V.;George,J.;Liu,S.X.;Ikonomi,P.;Anderson,C.;Chizhikov,V. |
Journal: |
Appl Microbiol Biotechnol |
Title: |
Sequencing of the intergenic 16S-23S rRNA spacer (ITS) region of Mollicutes species and their identification using microarray-based assay and DNA sequencing |
Volume: |
71 |
Page(s): |
680-98 |
Year: |
2006 |
Keyword(s): |
GENBANK/AY729927
GENBANK/AY729928
GENBANK/AY729929
GENBANK/AY729930
GENBANK/AY729931
GENBANK/AY729932
GENBANK/AY729933
GENBANK/AY729934
GENBANK/AY729935
GENBANK/AY729936
GENBANK/AY736029
GENBANK/AY736030
GENBANK/AY736031
GENBANK/AY736032
GENBANK/AY736033
GENBANK/AY737010
GENBANK/AY737011
GENBANK/AY737012
GENBANK/AY737013
GENBANK/AY738726
GENBANK/AY738727
GENBANK/AY738728
GENBANK/AY738737
GENBANK/AY738738
GENBANK/AY738739
GENBANK/AY740425
GENBANK/AY740426
GENBANK/AY740427
GENBANK/AY740428
GENBANK/AY740429
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GENBANK/AY765210
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GENBANK/AY765212
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GENBANK/AY800346
GENBANK/AY800347
GENBANK/AY816337
GENBANK/AY816338
GENBANK/AY816339
GENBANK/AY816340
GENBANK/AY816341
GENBANK/AY816342
GENBANK/AY816343
GENBANK/AY816344
GENBANK/AY816345
GENBANK/AY816346
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GENBANK/AY973565
GENBANK/AY973566
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GENBANK/AY973568
GENBANK/AY973569
GENBANK/AY973570
GENBANK/AY973571
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GENBANK/AY973573
GENBANK/AY973574
GENBANK/AY973575
GENBANK/AY974058
GENBANK/AY974059
GENBANK/AY974060
GENBANK/AY974061
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GENBANK/AY974068
GENBANK/AY974069
GENBANK/DQ004899
GENBANK/DQ004900
GENBANK/DQ004901
GENBANK/DQ004902
GENBANK/DQ004903
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GENBANK/DQ004905
GENBANK/DQ004906
GENBANK/DQ004907
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GENBANK/DQ004909
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GENBANK/DQ004939
GENBANK/DQ004940
GENBANK/DQ004941
GENBANK/DQ004942
GENBANK/DQ004943
GENBANK/DQ004944
Animals
Bacterial Typing Techniques
DNA, Bacterial/analysis
DNA, Ribosomal Spacer/*analysis
Humans
Molecular Sequence Data
Mollicutes/*classification/genetics
Oligonucleotide Array Sequence Analysis/*methods
Polymerase Chain Reaction/methods
RNA, Ribosomal, 16S/*genetics
RNA, Ribosomal, 23S/*genetics
Sensitivity and Specificity
Sequence Analysis, DNA/*methods
Species Specificity
|
Remarks: |
We have completed sequencing the 16S-23S rRNA intergenic transcribed spacer (ITS) region of most known Mycoplasma , Acholeplasma , Ureaplasma , Mesoplasma , and Spiroplasma species. Analysis of the sequence data revealed a significant interspecies variability and low intraspecies polymorphism of the ITS region among Mollicutes . This finding enabled the application of a combined polymerase chain reaction-microarray technology for identifying Mollicutes species. The microarray included individual species-specific oligonucleotide probes for characterizing human Mollicutes species and other species known to be common cell line contaminants. Evaluation of the microarray was conducted using multiple, previously characterized, Mollicutes species. The microarray analysis of the samples used demonstrated a highly specific assay, which is capable of rapid and accurate discrimination among Mollicutes species. |
URL: |
16470366 |
|
|
Data: |
(ATCC 15531) Type strain / MRL Colindale in 1967 / L. Hayflick / C. Liu / Human, pneumonia / Liu, C. (1957) J. exp. Med. 106, 455 / Liu, C. et al. (1959) J. exp. Med. 109, 545 / Chanock, R. M. et al. (1962) Proc. natn. Acad. Sci. U. S. A. 48, 41 / Chanock, R. M. et al. (1963) Science, 140, 662
|
Accession Date: |
01/01/1967
|
History: |
HAYFLICK L-ISOLATED BY LIU C
|
Authority: |
Somerson et al. 1963 (AL)
|
Depositor: |
MRL, PHLS COLINDALE
|
Taxonomy: |
TaxLink: S2064 (Mycoplasma pneumoniae Somerson et al. 1963) - Date of change: 5/02/2003
|
Biosafety Responsibility: |
It is the responsibility of the customer to ensure that their facilities comply with biosafety regulations for their own country
|
The Culture Collections hold cell cultures, bacteria, fungi and virus strains from worldwide sources. Our scientists ensure that the identification of the cultures is correct and they remain unchanged from when they are first deposited with the Collection. Nevertheless, some of the data we provide about the cultures is supplied by the person depositing the strains and, although we have multiple checking procedures in place, we cannot always verify all their data. Please note that the Culture Collections cannot be held responsible for any inaccuracies in the data provided by the depositors.
Cultures supplied by Culture Collections are to be used as controls for microbiology testing and for research purposes only. Please view the Terms & Conditions of Supply for more information.